Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MIR4651-201ENST00000582622 73 ntBASIC17.52■□□□□ 0.4
PIF1Q9H611 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.52■□□□□ 0.4
PIF1Q9H611 AC006058.3-201ENST00000606217 1069 ntBASIC17.52■□□□□ 0.4
PIF1Q9H611 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PIF1Q9H611 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PIF1Q9H611 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PIF1Q9H611 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PIF1Q9H611 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.51■□□□□ 0.39
PIF1Q9H611 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 AC128676.1-201ENST00000454392 318 ntBASIC17.51■□□□□ 0.39
PIF1Q9H611 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.51■□□□□ 0.39
PIF1Q9H611 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.51■□□□□ 0.39
PIF1Q9H611 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.51■□□□□ 0.39
PIF1Q9H611 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.51■□□□□ 0.39
PIF1Q9H611 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 AC131212.4-201ENST00000623606 975 ntBASIC17.51■□□□□ 0.39
PIF1Q9H611 AC073648.6-201ENST00000641589 218 ntBASIC17.51■□□□□ 0.39
PIF1Q9H611 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.51■□□□□ 0.39
PIF1Q9H611 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
PIF1Q9H611 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.51■□□□□ 0.39
PIF1Q9H611 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PIF1Q9H611 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PIF1Q9H611 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.5■□□□□ 0.39
PIF1Q9H611 MYLKP1-201ENST00000509077 1580 ntBASIC17.5■□□□□ 0.39
PIF1Q9H611 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.5■□□□□ 0.39
PIF1Q9H611 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 AC239809.2-201ENST00000415381 517 ntBASIC17.5■□□□□ 0.39
PIF1Q9H611 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.5■□□□□ 0.39
PIF1Q9H611 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 AC099398.1-201ENST00000567919 2776 ntBASIC17.5■□□□□ 0.39
PIF1Q9H611 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PIF1Q9H611 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PIF1Q9H611 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.49■□□□□ 0.39
PIF1Q9H611 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PIF1Q9H611 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 KRT16P5-201ENST00000455284 522 ntBASIC17.49■□□□□ 0.39
PIF1Q9H611 AC091390.4-202ENST00000476426 537 ntBASIC17.49■□□□□ 0.39
PIF1Q9H611 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.49■□□□□ 0.39
PIF1Q9H611 PRSS44-201ENST00000515154 1146 ntBASIC17.49■□□□□ 0.39
PIF1Q9H611 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms