Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 MTMR9LP-203ENST00000426597 1545 ntBASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 AL162741.1-201ENST00000565563 1558 ntBASIC16.98■□□□□ 0.31
UBQLN3Q9H347 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 AL499627.1-201ENST00000569373 2188 ntBASIC16.98■□□□□ 0.31
UBQLN3Q9H347 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 AC068587.9-201ENST00000641814 219 ntBASIC16.98■□□□□ 0.31
UBQLN3Q9H347 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 AC068880.1-201ENST00000507289 2297 ntBASIC16.98■□□□□ 0.31
UBQLN3Q9H347 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.98■□□□□ 0.31
UBQLN3Q9H347 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.97■□□□□ 0.31
UBQLN3Q9H347 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN3Q9H347 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 PCDHB18P-201ENST00000524813 2368 ntBASIC16.96■□□□□ 0.31
UBQLN3Q9H347 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN3Q9H347 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms