Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 AC128676.1-201ENST00000454392 318 ntBASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 FAM201B-201ENST00000458407 597 ntBASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 C1QBPP2-201ENST00000528754 825 ntBASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHACTR1Q9C0D0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 AL135905.2-201ENST00000584934 1404 ntBASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 AC139713.2-201ENST00000641328 2723 ntBASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 AC009065.1-201ENST00000564055 1225 ntBASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHACTR1Q9C0D0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 RPPH1-201ENST00000516869 333 ntBASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 MIR3180-4-201ENST00000582223 153 ntBASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 AL645608.8-201ENST00000606034 2086 ntBASIC18.56■□□□□ 0.56
PHACTR1Q9C0D0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.55■□□□□ 0.56
PHACTR1Q9C0D0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms