Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC091271.1-201ENST00000611877 1162 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC010536.3-201ENST00000620306 533 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC092471.2-201ENST00000637219 651 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 EEF1A1P32-201ENST00000418613 1347 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 NPM1P14-201ENST00000343743 866 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AL356057.2-201ENST00000403318 432 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 TYMSP1-201ENST00000407851 869 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 OR7E89P-201ENST00000411729 822 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 OR4D8P-201ENST00000431137 930 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 OR7E23P-201ENST00000435600 1048 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 MTCO3P38-201ENST00000468910 766 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 HLA-J-202ENST00000469281 1241 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 ARL2BPP6-201ENST00000512757 439 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SAP30L-AS1-203ENST00000522312 569 ntTSL 4 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AL512347.1-201ENST00000566420 503 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 MIR3668-201ENST00000582138 75 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC008759.1-201ENST00000589783 983 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC008751.1-201ENST00000600438 342 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AL049840.4-201ENST00000602422 811 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 FAM153B-221ENST00000611539 1050 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC087284.1-201ENST00000614119 1049 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AL603755.1-201ENST00000619504 163 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 AC079602.4-201ENST00000637836 532 ntBASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP3-3Q9BYR6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC11.4□□□□□ -0.59
KRTAP3-3Q9BYR6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.4□□□□□ -0.59
KRTAP3-3Q9BYR6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 FOXO3B-201ENST00000395675 1928 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 OR4G2P-201ENST00000328113 903 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 NANOGP5-201ENST00000424456 877 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AC090018.1-201ENST00000434369 367 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 CD46P1-201ENST00000441364 763 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 OR2L9P-201ENST00000444456 913 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AC009963.4-201ENST00000448535 339 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 AC009961.3-201ENST00000449832 765 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 RP9P-202ENST00000450133 1212 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 ATG12P2-201ENST00000456830 416 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 GMCL1P1-201ENST00000463439 1581 ntBASIC11.39□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC00635-205ENST00000473528 812 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms