Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 RPS2P1-201ENST00000434010 821 ntBASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
RTFDC1Q9BY42 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AC012640.2-201ENST00000561606 901 ntBASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AC140113.2-201ENST00000604370 208 ntBASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 AC025062.2-201ENST00000605477 670 ntBASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTFDC1Q9BY42 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 AC055717.3-201ENST00000622967 595 ntBASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 AL356309.3-201ENST00000624132 1934 ntBASIC22.16■■□□□ 1.14
RTFDC1Q9BY42 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 AC098831.1-202ENST00000438821 336 ntBASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 AL591424.1-201ENST00000442569 1213 ntBASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 AL356488.2-201ENST00000602755 427 ntBASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 HLA-J-201ENST00000462773 1622 ntBASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 MYLKP1-201ENST00000509077 1580 ntBASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.15■■□□□ 1.14
RTFDC1Q9BY42 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms