Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 AC069544.1-201ENST00000609399 999 ntBASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 AL359736.2-201ENST00000621992 437 ntBASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 UBALD1-205ENST00000590891 2641 ntBASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 AC108860.2-201ENST00000562760 2183 ntBASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RPPH1-201ENST00000516869 333 ntBASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 AC005829.2-201ENST00000571422 1056 ntBASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFAF3Q9BU61 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms