Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 AC008550.1-201ENST00000511500 884 ntBASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 SLC25A1P4-201ENST00000567977 778 ntBASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 AC068587.9-201ENST00000641814 219 ntBASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 KRT8P32-201ENST00000512863 1461 ntBASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRDL1Q9BU40 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 AL355355.2-201ENST00000442321 338 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 AC026471.5-201ENST00000615068 467 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 REXO1L10P-201ENST00000615707 1290 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 REXO1L12P-201ENST00000622156 912 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 MTMR9LP-203ENST00000426597 1545 ntBASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRDL1Q9BU40 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 MFAP1P1-201ENST00000442257 1255 ntBASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRDL1Q9BU40 AC097488.1-201ENST00000507834 756 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms