Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 KRT19P2-202ENST00000557173 1012 ntBASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN3Q9BTN0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 AC003669.1-201ENST00000334569 611 ntBASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 AC074386.1-202ENST00000463561 864 ntBASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 AL596325.1-201ENST00000563991 1082 ntBASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 AC025048.6-201ENST00000634326 1161 ntBASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN3Q9BTN0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 LINC01521-201ENST00000504184 1943 ntBASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 AL353135.1-201ENST00000606729 504 ntBASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN3Q9BTN0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 IGLL3P-201ENST00000412472 434 ntBASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 COX5BP8-201ENST00000416911 349 ntBASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 AC004790.2-201ENST00000623588 572 ntBASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.16■□□□□ 0.5
LRFN3Q9BTN0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 GUSBP5-202ENST00000510805 1989 ntBASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
LRFN3Q9BTN0 MIR943-201ENST00000401286 94 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms