Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 PPP1R14BP5-201ENST00000440334 435 ntBASIC10.93□□□□□ -0.66
LIMD2Q9BT23 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LIMD2Q9BT23 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC004980.1-204ENST00000429707 299 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 FAM207BP-201ENST00000447172 505 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 Z85996.1-201ENST00000494644 937 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SPIB-206ENST00000596074 847 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 CR392000.1-201ENST00000624770 1228 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 GOLGA6L5P-202ENST00000515341 1828 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC009053.2-201ENST00000563701 2365 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 FSCN1P1-201ENST00000568912 1481 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 AC135050.7-201ENST00000624508 2218 ntBASIC10.92□□□□□ -0.66
LIMD2Q9BT23 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LIMD2Q9BT23 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms