Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VRK1Q99986 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.18■□□□□ 0.18
VRK1Q99986 RNF152P1-201ENST00000397754 604 ntBASIC16.18■□□□□ 0.18
VRK1Q99986 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK1Q99986 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VRK1Q99986 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK1Q99986 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 YBX1P2-201ENST00000489612 999 ntBASIC16.18■□□□□ 0.18
VRK1Q99986 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VRK1Q99986 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.18■□□□□ 0.18
VRK1Q99986 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 AL138966.2-201ENST00000621997 464 ntBASIC16.18■□□□□ 0.18
VRK1Q99986 AC012313.1-201ENST00000593393 3059 ntBASIC16.18■□□□□ 0.18
VRK1Q99986 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK1Q99986 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.18■□□□□ 0.18
VRK1Q99986 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
VRK1Q99986 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 AC006333.2-201ENST00000607957 2099 ntBASIC16.17■□□□□ 0.18
VRK1Q99986 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.17■□□□□ 0.18
VRK1Q99986 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.17■□□□□ 0.18
VRK1Q99986 TSPY21P-201ENST00000433481 731 ntBASIC16.17■□□□□ 0.18
VRK1Q99986 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 AC022616.7-201ENST00000525383 220 ntBASIC16.17■□□□□ 0.18
VRK1Q99986 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.17■□□□□ 0.18
VRK1Q99986 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VRK1Q99986 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK1Q99986 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK1Q99986 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
VRK1Q99986 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
VRK1Q99986 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
VRK1Q99986 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
VRK1Q99986 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VRK1Q99986 TSPY5P-201ENST00000426936 936 ntBASIC16.16■□□□□ 0.18
VRK1Q99986 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.16■□□□□ 0.18
VRK1Q99986 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.16■□□□□ 0.18
VRK1Q99986 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.16■□□□□ 0.18
VRK1Q99986 AL031432.5-201ENST00000641059 760 ntBASIC16.16■□□□□ 0.18
VRK1Q99986 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
VRK1Q99986 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VRK1Q99986 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
VRK1Q99986 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms