Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE1Q99829 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.33■□□□□ 0.53
CPNE1Q99829 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE1Q99829 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE1Q99829 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.33■□□□□ 0.53
CPNE1Q99829 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE1Q99829 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CPNE1Q99829 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE1Q99829 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE1Q99829 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
CPNE1Q99829 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.33■□□□□ 0.52
CPNE1Q99829 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE1Q99829 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE1Q99829 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.33■□□□□ 0.52
CPNE1Q99829 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE1Q99829 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 AC020916.1-201ENST00000587762 1774 ntBASIC18.32■□□□□ 0.52
CPNE1Q99829 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.32■□□□□ 0.52
CPNE1Q99829 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE1Q99829 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE1Q99829 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE1Q99829 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 KRT18P23-201ENST00000435622 1283 ntBASIC18.32■□□□□ 0.52
CPNE1Q99829 AL158047.1-201ENST00000445918 881 ntBASIC18.32■□□□□ 0.52
CPNE1Q99829 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE1Q99829 AC026471.5-201ENST00000615068 467 ntBASIC18.32■□□□□ 0.52
CPNE1Q99829 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE1Q99829 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE1Q99829 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 AC099343.3-201ENST00000605834 2503 ntBASIC18.31■□□□□ 0.52
CPNE1Q99829 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE1Q99829 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE1Q99829 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE1Q99829 AL023803.3-201ENST00000615559 522 ntBASIC18.31■□□□□ 0.52
CPNE1Q99829 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE1Q99829 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE1Q99829 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE1Q99829 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE1Q99829 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CPNE1Q99829 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE1Q99829 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE1Q99829 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CPNE1Q99829 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE1Q99829 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE1Q99829 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE1Q99829 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE1Q99829 SLC25A1P2-201ENST00000430693 912 ntBASIC18.3■□□□□ 0.52
CPNE1Q99829 TSPY17P-201ENST00000450329 467 ntBASIC18.3■□□□□ 0.52
CPNE1Q99829 WWOX-216ENST00000569818 525 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms