Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 NTF6B-201ENST00000591913 560 ntBASIC15.22■□□□□ 0.03
GAFA1Q96PS6 AC083849.1-201ENST00000615227 514 ntBASIC15.22■□□□□ 0.03
GAFA1Q96PS6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 NEFHP1-201ENST00000412845 2629 ntBASIC15.22■□□□□ 0.03
GAFA1Q96PS6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 PHGDH-209ENST00000641074 1780 ntBASIC15.21■□□□□ 0.03
GAFA1Q96PS6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 VENTXP5-201ENST00000523979 775 ntBASIC15.21■□□□□ 0.03
GAFA1Q96PS6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 AC024563.2-201ENST00000603282 481 ntBASIC15.21■□□□□ 0.03
GAFA1Q96PS6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GAFA1Q96PS6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GAFA1Q96PS6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 AC135050.7-201ENST00000624508 2218 ntBASIC15.2■□□□□ 0.02
GAFA1Q96PS6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 AC008687.5-201ENST00000593746 558 ntBASIC15.2■□□□□ 0.02
GAFA1Q96PS6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 AL590326.2-201ENST00000625139 305 ntBASIC15.2■□□□□ 0.02
GAFA1Q96PS6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GAFA1Q96PS6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms