Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 AC011676.5-201ENST00000624864 2660 ntBASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COX4I2Q96KJ9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
COX4I2Q96KJ9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 AC145285.6-201ENST00000604632 637 ntBASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COX4I2Q96KJ9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 AL355355.2-201ENST00000442321 338 ntBASIC17■□□□□ 0.31
COX4I2Q96KJ9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 AC005363.2-201ENST00000618631 242 ntBASIC17■□□□□ 0.31
COX4I2Q96KJ9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COX4I2Q96KJ9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17■□□□□ 0.31
COX4I2Q96KJ9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
COX4I2Q96KJ9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms