Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL356309.3-201ENST00000624132 1934 ntBASIC19.77■□□□□ 0.76
LRCH3Q96II8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRCH3Q96II8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.77■□□□□ 0.76
LRCH3Q96II8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRCH3Q96II8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRCH3Q96II8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LRCH3Q96II8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AC104417.2-201ENST00000562989 1793 ntBASIC19.76■□□□□ 0.75
LRCH3Q96II8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LRCH3Q96II8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCH3Q96II8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 PRSS29P-201ENST00000440800 595 ntBASIC19.75■□□□□ 0.75
LRCH3Q96II8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 AC012645.4-201ENST00000610691 1061 ntBASIC19.75■□□□□ 0.75
LRCH3Q96II8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
LRCH3Q96II8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRCH3Q96II8 AC008556.1-201ENST00000610908 2040 ntBASIC19.75■□□□□ 0.75
LRCH3Q96II8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 TSEN15P1-201ENST00000423257 515 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 AL078644.1-201ENST00000609881 752 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 AL008721.1-201ENST00000609964 604 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 AC107918.4-202ENST00000641623 219 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 AC092865.6-201ENST00000642101 219 ntBASIC19.74■□□□□ 0.75
LRCH3Q96II8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
LRCH3Q96II8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRCH3Q96II8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
LRCH3Q96II8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRCH3Q96II8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRCH3Q96II8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms