Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 AC091076.1-201ENST00000610741 619 ntBASIC18.87■□□□□ 0.61
IFT43Q96FT9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 AC036111.1-201ENST00000533973 1582 ntBASIC18.86■□□□□ 0.61
IFT43Q96FT9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 MIR564-202ENST00000385049 94 ntBASIC18.86■□□□□ 0.61
IFT43Q96FT9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 HOMER2P1-201ENST00000455653 964 ntBASIC18.86■□□□□ 0.61
IFT43Q96FT9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFT43Q96FT9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
IFT43Q96FT9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 WIZP1-201ENST00000531444 2299 ntBASIC18.85■□□□□ 0.61
IFT43Q96FT9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.85■□□□□ 0.61
IFT43Q96FT9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.85■□□□□ 0.61
IFT43Q96FT9 AC092647.4-201ENST00000457211 535 ntBASIC18.85■□□□□ 0.61
IFT43Q96FT9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
IFT43Q96FT9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFT43Q96FT9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 AC104581.1-202ENST00000635932 2618 ntBASIC18.84■□□□□ 0.61
IFT43Q96FT9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 AP000523.1-201ENST00000398242 1049 ntBASIC18.84■□□□□ 0.61
IFT43Q96FT9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms