Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 AC083849.1-201ENST00000615227 514 ntBASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 AL590326.2-201ENST00000625139 305 ntBASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTHRC1Q96CG8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.96■□□□□ 0.3
CTHRC1Q96CG8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 NOC2LP1-202ENST00000452600 2235 ntBASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 SPDYE13P-201ENST00000445314 798 ntBASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 AL445228.2-201ENST00000605589 952 ntBASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 LINC01311-201ENST00000565162 1445 ntBASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTHRC1Q96CG8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 AC138028.4-201ENST00000564984 1845 ntBASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 KRT18P35-201ENST00000510488 1269 ntBASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 LINC00167-201ENST00000530583 1419 ntBASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 AC132938.6-201ENST00000623828 1655 ntBASIC16.94■□□□□ 0.3
CTHRC1Q96CG8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms