Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 NEFHP1-201ENST00000412845 2629 ntBASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3KBP1Q96B97 HEIH-201ENST00000623091 1652 ntBASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 IER3-202ENST00000376377 1350 ntBASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SH3KBP1Q96B97 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SH3KBP1Q96B97 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SH3KBP1Q96B97 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.14■□□□□ 0.5
SH3KBP1Q96B97 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 VENTXP5-201ENST00000523979 775 ntBASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 AC008556.1-201ENST00000610908 2040 ntBASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH3KBP1Q96B97 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 MIR564-202ENST00000385049 94 ntBASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 SPDYE15P-201ENST00000424157 909 ntBASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 AC068587.9-201ENST00000641814 219 ntBASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 HOXB1-202ENST00000577092 1414 ntBASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH3KBP1Q96B97 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms