Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 AL355355.2-201ENST00000442321 338 ntBASIC16.47■□□□□ 0.23
PTP4A1Q93096 MCCD1P1-208ENST00000445732 328 ntBASIC16.47■□□□□ 0.23
PTP4A1Q93096 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 AC116562.2-201ENST00000507042 360 ntBASIC16.46■□□□□ 0.23
PTP4A1Q93096 NUDT16P1-203ENST00000513809 620 ntBASIC16.46■□□□□ 0.23
PTP4A1Q93096 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTP4A1Q93096 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTP4A1Q93096 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
PTP4A1Q93096 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PTP4A1Q93096 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.46■□□□□ 0.22
PTP4A1Q93096 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTP4A1Q93096 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTP4A1Q93096 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PTP4A1Q93096 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 SDHAP2-201ENST00000455183 2001 ntBASIC16.45■□□□□ 0.22
PTP4A1Q93096 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTP4A1Q93096 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTP4A1Q93096 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTP4A1Q93096 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTP4A1Q93096 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.44■□□□□ 0.22
PTP4A1Q93096 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.44■□□□□ 0.22
PTP4A1Q93096 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTP4A1Q93096 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTP4A1Q93096 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms