Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 AC034232.1-201ENST00000506026 1064 ntBASIC19.69■□□□□ 0.74
SEMA4DQ92854 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA4DQ92854 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SEMA4DQ92854 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 AL391807.1-203ENST00000604392 2365 ntBASIC19.68■□□□□ 0.74
SEMA4DQ92854 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 AL359075.1-203ENST00000462729 1002 ntBASIC19.68■□□□□ 0.74
SEMA4DQ92854 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 AC018470.1-201ENST00000624790 3129 ntBASIC19.68■□□□□ 0.74
SEMA4DQ92854 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA4DQ92854 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA4DQ92854 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 DUX4L26-201ENST00000489078 1255 ntBASIC19.67■□□□□ 0.74
SEMA4DQ92854 AC063952.2-201ENST00000498792 1227 ntBASIC19.67■□□□□ 0.74
SEMA4DQ92854 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 HYMAI.1-201ENST00000620949 238 ntBASIC19.67■□□□□ 0.74
SEMA4DQ92854 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA4DQ92854 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4DQ92854 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SEMA4DQ92854 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4DQ92854 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms