Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.85■■□□□ 1.41
RTF1Q92541 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.85■■□□□ 1.41
RTF1Q92541 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RTF1Q92541 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.85■■□□□ 1.41
RTF1Q92541 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.84■■□□□ 1.41
RTF1Q92541 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
RTF1Q92541 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 RNF165-205ENST00000588679 2904 ntBASIC23.84■■□□□ 1.41
RTF1Q92541 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RTF1Q92541 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RTF1Q92541 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
RTF1Q92541 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.84■■□□□ 1.41
RTF1Q92541 VENTXP7-201ENST00000475503 772 ntBASIC23.84■■□□□ 1.41
RTF1Q92541 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.84■■□□□ 1.41
RTF1Q92541 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.84■■□□□ 1.41
RTF1Q92541 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RTF1Q92541 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTF1Q92541 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.84■■□□□ 1.41
RTF1Q92541 LINC00167-201ENST00000530583 1419 ntBASIC23.84■■□□□ 1.41
RTF1Q92541 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.83■■□□□ 1.41
RTF1Q92541 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.83■■□□□ 1.41
RTF1Q92541 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RTF1Q92541 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 CROCCP3-202ENST00000420820 1947 ntBASIC23.83■■□□□ 1.41
RTF1Q92541 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RTF1Q92541 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RTF1Q92541 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.83■■□□□ 1.41
RTF1Q92541 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.83■■□□□ 1.41
RTF1Q92541 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.83■■□□□ 1.41
RTF1Q92541 AC011840.4-201ENST00000578471 627 ntBASIC23.83■■□□□ 1.41
RTF1Q92541 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RTF1Q92541 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.83■■□□□ 1.41
RTF1Q92541 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.83■■□□□ 1.41
RTF1Q92541 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 LINC01126-201ENST00000623515 1646 ntBASIC23.83■■□□□ 1.41
RTF1Q92541 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTF1Q92541 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
RTF1Q92541 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTF1Q92541 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTF1Q92541 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.83■■□□□ 1.4
RTF1Q92541 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RTF1Q92541 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTF1Q92541 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RTF1Q92541 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.82■■□□□ 1.4
RTF1Q92541 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.82■■□□□ 1.4
RTF1Q92541 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTF1Q92541 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTF1Q92541 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.82■■□□□ 1.4
RTF1Q92541 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTF1Q92541 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.82■■□□□ 1.4
RTF1Q92541 TSPY12P-201ENST00000421279 868 ntBASIC23.82■■□□□ 1.4
RTF1Q92541 TPM4P1-201ENST00000436100 807 ntBASIC23.82■■□□□ 1.4
RTF1Q92541 KRT17P6-201ENST00000453795 1220 ntBASIC23.82■■□□□ 1.4
RTF1Q92541 AP000974.1-201ENST00000623909 2387 ntBASIC23.82■■□□□ 1.4
RTF1Q92541 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTF1Q92541 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTF1Q92541 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.82■■□□□ 1.4
RTF1Q92541 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.81■■□□□ 1.4
RTF1Q92541 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.81■■□□□ 1.4
RTF1Q92541 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.81■■□□□ 1.4
RTF1Q92541 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RTF1Q92541 FOSL1P1-201ENST00000511041 816 ntBASIC23.81■■□□□ 1.4
RTF1Q92541 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.81■■□□□ 1.4
RTF1Q92541 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.81■■□□□ 1.4
RTF1Q92541 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTF1Q92541 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.8■■□□□ 1.4
RTF1Q92541 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 AC126763.1-201ENST00000552015 2118 ntBASIC23.8■■□□□ 1.4
RTF1Q92541 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTF1Q92541 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms