Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 AC093458.2-201ENST00000623150 629 ntBASIC18.46■□□□□ 0.55
CHD5Q8TDI0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHD5Q8TDI0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHD5Q8TDI0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CHD5Q8TDI0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHD5Q8TDI0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 AC008687.5-201ENST00000593746 558 ntBASIC18.45■□□□□ 0.54
CHD5Q8TDI0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD5Q8TDI0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 KRT18P65-201ENST00000439811 1286 ntBASIC18.44■□□□□ 0.54
CHD5Q8TDI0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.44■□□□□ 0.54
CHD5Q8TDI0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 AL138831.2-201ENST00000606564 490 ntBASIC18.44■□□□□ 0.54
CHD5Q8TDI0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.44■□□□□ 0.54
CHD5Q8TDI0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD5Q8TDI0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD5Q8TDI0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHD5Q8TDI0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD5Q8TDI0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHD5Q8TDI0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms