Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 TREX1-205ENST00000625293 1783 ntBASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SPTSSBQ8NFR3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SPTSSBQ8NFR3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms