Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 MIR3180-4-201ENST00000582223 153 ntBASIC16.04■□□□□ 0.16
CPEB3Q8NE35 AL031432.5-201ENST00000641059 760 ntBASIC16.04■□□□□ 0.16
CPEB3Q8NE35 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPEB3Q8NE35 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 MIR149-201ENST00000384879 89 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 RN7SL850P-201ENST00000579959 291 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC006011.2-201ENST00000621313 1158 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC009102.3-201ENST00000623118 1491 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.03■□□□□ 0.16
CPEB3Q8NE35 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPEB3Q8NE35 AC020763.4-201ENST00000623414 4170 ntBASIC16.02■□□□□ 0.16
CPEB3Q8NE35 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 AC104076.2-201ENST00000448912 469 ntBASIC16.02■□□□□ 0.16
CPEB3Q8NE35 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 MIR3917-201ENST00000580971 93 ntBASIC16.02■□□□□ 0.16
CPEB3Q8NE35 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.02■□□□□ 0.16
CPEB3Q8NE35 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CPEB3Q8NE35 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPEB3Q8NE35 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms