Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 LINC01126-201ENST00000623515 1646 ntBASIC27.31■■□□□ 1.96
AFAP1Q8N556 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 AP006288.1-201ENST00000446065 395 ntBASIC27.31■■□□□ 1.96
AFAP1Q8N556 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
AFAP1Q8N556 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
AFAP1Q8N556 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 KRT18P2-201ENST00000447938 1258 ntBASIC27.3■■□□□ 1.96
AFAP1Q8N556 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 KRT18P28-201ENST00000453838 1332 ntBASIC27.3■■□□□ 1.96
AFAP1Q8N556 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
AFAP1Q8N556 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC27.3■■□□□ 1.96
AFAP1Q8N556 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
AFAP1Q8N556 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
AFAP1Q8N556 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 LAGE3P1-201ENST00000425356 484 ntBASIC27.29■■□□□ 1.96
AFAP1Q8N556 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
AFAP1Q8N556 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
AFAP1Q8N556 MTDHP5-201ENST00000598980 586 ntBASIC27.29■■□□□ 1.96
AFAP1Q8N556 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 AL032819.2-201ENST00000624543 2162 ntBASIC27.29■■□□□ 1.96
AFAP1Q8N556 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
AFAP1Q8N556 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
AFAP1Q8N556 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC27.28■■□□□ 1.96
AFAP1Q8N556 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
AFAP1Q8N556 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 AC211486.1-202ENST00000416371 468 ntBASIC27.28■■□□□ 1.96
AFAP1Q8N556 KRT18P27-201ENST00000427733 1299 ntBASIC27.28■■□□□ 1.96
AFAP1Q8N556 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.28■■□□□ 1.96
AFAP1Q8N556 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.28■■□□□ 1.96
AFAP1Q8N556 AC211476.1-201ENST00000503899 468 ntBASIC27.28■■□□□ 1.96
AFAP1Q8N556 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
AFAP1Q8N556 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC27.28■■□□□ 1.96
AFAP1Q8N556 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.27■■□□□ 1.96
AFAP1Q8N556 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
AFAP1Q8N556 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
AFAP1Q8N556 MYLKP1-201ENST00000509077 1580 ntBASIC27.26■■□□□ 1.96
AFAP1Q8N556 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
AFAP1Q8N556 SNAI3-AS1-205ENST00000568633 2096 ntBASIC27.26■■□□□ 1.95
AFAP1Q8N556 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
AFAP1Q8N556 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms