Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 BX276092.5-203ENST00000456199 560 ntBASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 PHGDH-209ENST00000641074 1780 ntBASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 AC093677.2-201ENST00000600169 1863 ntBASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.24■□□□□ 0.35
ARHGEF39Q8N4T4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 AC132938.6-201ENST00000623828 1655 ntBASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARHGEF39Q8N4T4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 AL845331.1-201ENST00000424978 1190 ntBASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 AL353801.3-201ENST00000609898 542 ntBASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 AC090164.3-201ENST00000610780 2143 ntBASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.22■□□□□ 0.35
ARHGEF39Q8N4T4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms