Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.32■□□□□ 0.36
CARFQ8N187 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.32■□□□□ 0.36
CARFQ8N187 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CARFQ8N187 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CARFQ8N187 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.32■□□□□ 0.36
CARFQ8N187 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CARFQ8N187 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CARFQ8N187 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CARFQ8N187 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CARFQ8N187 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CARFQ8N187 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.31■□□□□ 0.36
CARFQ8N187 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.31■□□□□ 0.36
CARFQ8N187 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 RN7SL510P-201ENST00000581311 263 ntBASIC17.31■□□□□ 0.36
CARFQ8N187 AP005901.3-202ENST00000581653 237 ntBASIC17.31■□□□□ 0.36
CARFQ8N187 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.31■□□□□ 0.36
CARFQ8N187 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.31■□□□□ 0.36
CARFQ8N187 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 LINC00602-201ENST00000629776 2065 ntBASIC17.31■□□□□ 0.36
CARFQ8N187 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CARFQ8N187 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.31■□□□□ 0.36
CARFQ8N187 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CARFQ8N187 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.31■□□□□ 0.36
CARFQ8N187 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CARFQ8N187 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.3■□□□□ 0.36
CARFQ8N187 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CARFQ8N187 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.3■□□□□ 0.36
CARFQ8N187 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CARFQ8N187 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.3■□□□□ 0.36
CARFQ8N187 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 AC009533.2-201ENST00000543664 586 ntBASIC17.3■□□□□ 0.36
CARFQ8N187 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.3■□□□□ 0.36
CARFQ8N187 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.3■□□□□ 0.36
CARFQ8N187 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.3■□□□□ 0.36
CARFQ8N187 IFNL4P1-201ENST00000607083 540 ntBASIC17.3■□□□□ 0.36
CARFQ8N187 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.3■□□□□ 0.36
CARFQ8N187 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CARFQ8N187 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CARFQ8N187 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CARFQ8N187 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CARFQ8N187 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CARFQ8N187 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CARFQ8N187 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.29■□□□□ 0.36
CARFQ8N187 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.29■□□□□ 0.36
CARFQ8N187 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.29■□□□□ 0.36
CARFQ8N187 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 AC114341.1-201ENST00000618070 349 ntBASIC17.29■□□□□ 0.36
CARFQ8N187 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CARFQ8N187 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
CARFQ8N187 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms