Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 KRT89P-201ENST00000620027 1478 ntBASIC18.63■□□□□ 0.57
CHPFQ8IZ52 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPFQ8IZ52 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 FDX1P1-201ENST00000449115 551 ntBASIC18.62■□□□□ 0.57
CHPFQ8IZ52 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 KRT18P41-201ENST00000518924 1277 ntBASIC18.62■□□□□ 0.57
CHPFQ8IZ52 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 AL049812.1-201ENST00000432563 2267 ntBASIC18.62■□□□□ 0.57
CHPFQ8IZ52 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPFQ8IZ52 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.61■□□□□ 0.57
CHPFQ8IZ52 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPFQ8IZ52 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 RN7SL606P-201ENST00000472779 293 ntBASIC18.6■□□□□ 0.57
CHPFQ8IZ52 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 AC083906.6-201ENST00000641366 219 ntBASIC18.6■□□□□ 0.57
CHPFQ8IZ52 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHPFQ8IZ52 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms