Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE9Q8IYJ1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 HCG11-201ENST00000411553 5696 ntBASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 SDHAP2-201ENST00000455183 2001 ntBASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 AC009102.3-201ENST00000623118 1491 ntBASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE9Q8IYJ1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 MIR149-201ENST00000384879 89 ntBASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CPNE9Q8IYJ1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE9Q8IYJ1 KRT18P22-201ENST00000402024 1347 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms