Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 AC113404.2-201ENST00000507884 177 ntBASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZC3H3Q8IXZ2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 RASA4DP-201ENST00000460726 1199 ntBASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 LETM1P2-201ENST00000597330 2178 ntBASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZC3H3Q8IXZ2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 GNAS-203ENST00000306120 1878 ntBASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 COX11P1-201ENST00000489116 835 ntBASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 AC008687.5-201ENST00000593746 558 ntBASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 KRT89P-201ENST00000620027 1478 ntBASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZC3H3Q8IXZ2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AC134043.2-201ENST00000624206 2238 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 PCDHB18P-201ENST00000524813 2368 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 SPDYE15P-201ENST00000424157 909 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 FAM210CP-201ENST00000445714 574 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AC034232.1-201ENST00000506026 1064 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 KRT18P21-201ENST00000515767 1272 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AC005363.2-201ENST00000618631 242 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 AL031432.5-201ENST00000641059 760 ntBASIC19.83■□□□□ 0.77
ZC3H3Q8IXZ2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZC3H3Q8IXZ2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.82■□□□□ 0.76
ZC3H3Q8IXZ2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.82■□□□□ 0.76
ZC3H3Q8IXZ2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZC3H3Q8IXZ2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms