Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD2Q8IV50 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 MTMR9LP-203ENST00000426597 1545 ntBASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD2Q8IV50 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 CROCCP2-202ENST00000412962 2773 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 GPX1P1-201ENST00000388829 606 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 CYP2T1P-201ENST00000432607 1285 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 AC008694.1-202ENST00000636953 945 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 MYC-208ENST00000641036 567 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 AC092850.2-201ENST00000623821 2697 ntBASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD2Q8IV50 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYSMD2Q8IV50 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LYSMD2Q8IV50 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD2Q8IV50 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms