Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM1Q86UE6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 RPS2P4-201ENST00000476944 856 ntBASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 KRT8P50-201ENST00000562022 1438 ntBASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
LRRTM1Q86UE6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRTM1Q86UE6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 AC141586.5-201ENST00000624546 2050 ntBASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 AL353708.3-201ENST00000610272 989 ntBASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 AC011298.2-201ENST00000617989 482 ntBASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM1Q86UE6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms