Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD3Q7Z3D4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 AC092597.1-201ENST00000487352 616 ntBASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 AC020916.1-201ENST00000587762 1774 ntBASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD3Q7Z3D4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.39■□□□□ 0.54
LYSMD3Q7Z3D4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LYSMD3Q7Z3D4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LYSMD3Q7Z3D4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.39■□□□□ 0.54
LYSMD3Q7Z3D4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LYSMD3Q7Z3D4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 AC112907.2-201ENST00000448639 330 ntBASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.39■□□□□ 0.53
LYSMD3Q7Z3D4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 PVRIG2P-201ENST00000435460 978 ntBASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms