Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC149Q6ZUS6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 MYLKP1-201ENST00000509077 1580 ntBASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 KRT18P58-201ENST00000527480 1120 ntBASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 SLC25A1P1-201ENST00000528351 927 ntBASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 AL591684.3-201ENST00000605187 298 ntBASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC149Q6ZUS6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC149Q6ZUS6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 AC096582.2-201ENST00000510860 516 ntBASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 BNIP3P18-201ENST00000593976 575 ntBASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC149Q6ZUS6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC149Q6ZUS6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms