Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C11orf88Q6PI97 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf88Q6PI97 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 AC073592.3-201ENST00000625118 1834 ntBASIC15.96■□□□□ 0.15
C11orf88Q6PI97 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 LINC00896-202ENST00000609602 2128 ntBASIC15.96■□□□□ 0.15
C11orf88Q6PI97 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf88Q6PI97 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
C11orf88Q6PI97 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
C11orf88Q6PI97 AC116351.2-201ENST00000606540 1585 ntBASIC15.96■□□□□ 0.14
C11orf88Q6PI97 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 SIRPAP1-201ENST00000448467 1770 ntBASIC15.95■□□□□ 0.14
C11orf88Q6PI97 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf88Q6PI97 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms