Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 CDCA4P2-201ENST00000441182 718 ntBASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 MFSD11-216ENST00000590393 1141 ntBASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 PCDHA14-201ENST00000506751 2298 ntBASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AC026185.1-201ENST00000445748 174 ntBASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 KRT18P20-201ENST00000548986 1279 ntBASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AC008175.2-201ENST00000612840 297 ntBASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AC120498.10-201ENST00000621827 505 ntBASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM88Q6PEY1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 AC138028.4-201ENST00000564984 1845 ntBASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms