Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC62Q6P9F0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 AL499627.1-201ENST00000569373 2188 ntBASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 AC106795.1-205ENST00000512851 1056 ntBASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 AP002469.2-201ENST00000531724 424 ntBASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC62Q6P9F0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AP000347.1-202ENST00000435868 847 ntBASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AC008687.5-201ENST00000593746 558 ntBASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 BNIP3P18-201ENST00000593976 575 ntBASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AL121912.1-201ENST00000603683 238 ntBASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC62Q6P9F0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 SLC25A6P4-201ENST00000586535 553 ntBASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 REXO1L6P-202ENST00000619970 1078 ntBASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC62Q6P9F0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms