Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQA1Q5Y7H0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 MIR149-201ENST00000384879 89 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 FAM8A6P-201ENST00000407496 1135 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 AL157888.1-201ENST00000631930 593 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 AC009102.3-201ENST00000623118 1491 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 AC126763.1-201ENST00000552015 2118 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 WIZP1-201ENST00000531444 2299 ntBASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQA1Q5Y7H0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 AL138781.2-201ENST00000617896 1843 ntBASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DQA1Q5Y7H0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DQA1Q5Y7H0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms