Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC091812.2-201ENST00000619081 385 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 AC068587.10-201ENST00000641210 219 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 AC009237.14-201ENST00000609975 1594 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PRPF38BQ5VTL8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRPF38BQ5VTL8 AL133338.1-201ENST00000565695 1517 ntBASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 AC108073.2-201ENST00000464002 357 ntBASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 AC051619.7-201ENST00000568314 623 ntBASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRPF38BQ5VTL8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 BX005266.1-201ENST00000473402 457 ntBASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 AC004877.2-201ENST00000623941 599 ntBASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 AC125634.1-201ENST00000438758 1403 ntBASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.75■□□□□ 0.75
PRPF38BQ5VTL8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRPF38BQ5VTL8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 RCC2P3-201ENST00000418112 1537 ntBASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.73■□□□□ 0.75
PRPF38BQ5VTL8 DDX43P3-201ENST00000441064 443 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms