Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RC3H1Q5TC82 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 AC004967.1-201ENST00000453589 447 ntBASIC22.98■■□□□ 1.27
RC3H1Q5TC82 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 RNA5SP416-201ENST00000516838 111 ntBASIC22.98■■□□□ 1.27
RC3H1Q5TC82 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 AC079781.4-201ENST00000641908 219 ntBASIC22.98■■□□□ 1.27
RC3H1Q5TC82 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RC3H1Q5TC82 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 AC009947.1-201ENST00000444350 727 ntBASIC22.97■■□□□ 1.27
RC3H1Q5TC82 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.97■■□□□ 1.27
RC3H1Q5TC82 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 AC097374.2-201ENST00000618617 1306 ntBASIC22.97■■□□□ 1.27
RC3H1Q5TC82 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RC3H1Q5TC82 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 AC099343.3-201ENST00000605834 2503 ntBASIC22.96■■□□□ 1.27
RC3H1Q5TC82 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RC3H1Q5TC82 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 AC027796.2-201ENST00000575326 344 ntBASIC22.95■■□□□ 1.26
RC3H1Q5TC82 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 AC134684.3-201ENST00000641758 218 ntBASIC22.95■■□□□ 1.26
RC3H1Q5TC82 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RC3H1Q5TC82 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms