Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHROOM1Q2M3G4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 AC132008.2-207ENST00000454517 770 ntBASIC21.31■■□□□ 1
SHROOM1Q2M3G4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 AL591684.3-201ENST00000605187 298 ntBASIC21.31■■□□□ 1
SHROOM1Q2M3G4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 AC114341.1-201ENST00000618070 349 ntBASIC21.31■■□□□ 1
SHROOM1Q2M3G4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 AC126763.1-201ENST00000552015 2118 ntBASIC21.31■■□□□ 1
SHROOM1Q2M3G4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHROOM1Q2M3G4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHROOM1Q2M3G4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 TP73-AS1-210ENST00000637775 1455 ntBASIC21.29■■□□□ 1
SHROOM1Q2M3G4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.29■■□□□ 1
SHROOM1Q2M3G4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 AL049840.3-201ENST00000602669 611 ntBASIC21.28■■□□□ 1
SHROOM1Q2M3G4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHROOM1Q2M3G4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.27■■□□□ 1
SHROOM1Q2M3G4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms