Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 INGX-201ENST00000359239 846 ntBASIC18.48■□□□□ 0.55
PRAMEP78395 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEP78395 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEP78395 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PRAMEP78395 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEP78395 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRAMEP78395 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEP78395 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEP78395 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEP78395 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.47■□□□□ 0.55
PRAMEP78395 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEP78395 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.47■□□□□ 0.55
PRAMEP78395 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEP78395 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEP78395 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEP78395 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEP78395 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEP78395 AC099343.3-201ENST00000605834 2503 ntBASIC18.46■□□□□ 0.55
PRAMEP78395 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEP78395 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PRAMEP78395 ECEL1P2-202ENST00000465689 757 ntBASIC18.46■□□□□ 0.55
PRAMEP78395 AL512604.3-201ENST00000569583 964 ntBASIC18.46■□□□□ 0.55
PRAMEP78395 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEP78395 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PRAMEP78395 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEP78395 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 AC135776.1-201ENST00000319817 2481 ntBASIC18.46■□□□□ 0.55
PRAMEP78395 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRAMEP78395 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRAMEP78395 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEP78395 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PRAMEP78395 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRAMEP78395 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRAMEP78395 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 AL163051.1-201ENST00000569214 1512 ntBASIC18.45■□□□□ 0.54
PRAMEP78395 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PRAMEP78395 HMGA1P5-201ENST00000412453 271 ntBASIC18.45■□□□□ 0.54
PRAMEP78395 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms