Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBA52P62987 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBA52P62987 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
UBA52P62987 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
UBA52P62987 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.81■□□□□ 0.12
UBA52P62987 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
UBA52P62987 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.81■□□□□ 0.12
UBA52P62987 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBA52P62987 AC073508.3-201ENST00000619697 1419 ntBASIC15.81■□□□□ 0.12
UBA52P62987 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.81■□□□□ 0.12
UBA52P62987 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBA52P62987 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
UBA52P62987 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 AC126763.1-201ENST00000552015 2118 ntBASIC15.8■□□□□ 0.12
UBA52P62987 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
UBA52P62987 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBA52P62987 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.8■□□□□ 0.12
UBA52P62987 DUX4L26-201ENST00000489078 1255 ntBASIC15.8■□□□□ 0.12
UBA52P62987 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.8■□□□□ 0.12
UBA52P62987 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.8■□□□□ 0.12
UBA52P62987 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.8■□□□□ 0.12
UBA52P62987 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBA52P62987 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA52P62987 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.8■□□□□ 0.12
UBA52P62987 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBA52P62987 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA52P62987 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 AL162741.1-201ENST00000565563 1558 ntBASIC15.79■□□□□ 0.12
UBA52P62987 AL139384.1-201ENST00000612143 3047 ntBASIC15.79■□□□□ 0.12
UBA52P62987 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 FSCN1P1-201ENST00000568912 1481 ntBASIC15.79■□□□□ 0.12
UBA52P62987 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
UBA52P62987 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA52P62987 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
UBA52P62987 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms