Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.06■□□□□ 0.48
SRP54P61011 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SRP54P61011 MIR149-201ENST00000384879 89 ntBASIC18.06■□□□□ 0.48
SRP54P61011 DRAXINP1-201ENST00000437611 948 ntBASIC18.06■□□□□ 0.48
SRP54P61011 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.06■□□□□ 0.48
SRP54P61011 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.06■□□□□ 0.48
SRP54P61011 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.06■□□□□ 0.48
SRP54P61011 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.06■□□□□ 0.48
SRP54P61011 AC090616.6-201ENST00000582640 721 ntBASIC18.06■□□□□ 0.48
SRP54P61011 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.06■□□□□ 0.48
SRP54P61011 IGHV3-41-201ENST00000613121 348 ntBASIC18.06■□□□□ 0.48
SRP54P61011 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SRP54P61011 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.06■□□□□ 0.48
SRP54P61011 AC112777.1-201ENST00000540175 1423 ntBASIC18.06■□□□□ 0.48
SRP54P61011 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRP54P61011 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.05■□□□□ 0.48
SRP54P61011 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SRP54P61011 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.05■□□□□ 0.48
SRP54P61011 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SRP54P61011 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.05■□□□□ 0.48
SRP54P61011 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.05■□□□□ 0.48
SRP54P61011 TPSP2-201ENST00000561760 610 ntBASIC18.05■□□□□ 0.48
SRP54P61011 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SRP54P61011 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.05■□□□□ 0.48
SRP54P61011 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
SRP54P61011 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 KRT89P-201ENST00000620027 1478 ntBASIC18.05■□□□□ 0.48
SRP54P61011 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.05■□□□□ 0.48
SRP54P61011 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SRP54P61011 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.05■□□□□ 0.48
SRP54P61011 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRP54P61011 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 MYLKP1-201ENST00000509077 1580 ntBASIC18.04■□□□□ 0.48
SRP54P61011 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRP54P61011 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.04■□□□□ 0.48
SRP54P61011 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 AC009102.3-201ENST00000623118 1491 ntBASIC18.04■□□□□ 0.48
SRP54P61011 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.04■□□□□ 0.48
SRP54P61011 LINC00265-3P-201ENST00000447588 903 ntBASIC18.04■□□□□ 0.48
SRP54P61011 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.04■□□□□ 0.48
SRP54P61011 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.04■□□□□ 0.48
SRP54P61011 AL121894.2-201ENST00000602977 491 ntBASIC18.04■□□□□ 0.48
SRP54P61011 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.04■□□□□ 0.48
SRP54P61011 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRP54P61011 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.03■□□□□ 0.48
SRP54P61011 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.03■□□□□ 0.48
SRP54P61011 AP000867.3-201ENST00000524675 377 ntBASIC18.03■□□□□ 0.48
SRP54P61011 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.03■□□□□ 0.48
SRP54P61011 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.03■□□□□ 0.48
SRP54P61011 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.03■□□□□ 0.48
SRP54P61011 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRP54P61011 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms