Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.34■■□□□ 1.33
EIF4A1P60842 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.34■■□□□ 1.33
EIF4A1P60842 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.34■■□□□ 1.33
EIF4A1P60842 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.34■■□□□ 1.33
EIF4A1P60842 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.34■■□□□ 1.33
EIF4A1P60842 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.34■■□□□ 1.33
EIF4A1P60842 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.34■■□□□ 1.33
EIF4A1P60842 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
EIF4A1P60842 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.33■■□□□ 1.33
EIF4A1P60842 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
EIF4A1P60842 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.33■■□□□ 1.33
EIF4A1P60842 AC132938.6-201ENST00000623828 1655 ntBASIC23.33■■□□□ 1.33
EIF4A1P60842 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 KRT18P65-201ENST00000439811 1286 ntBASIC23.33■■□□□ 1.33
EIF4A1P60842 AC009078.2-202ENST00000463353 338 ntBASIC23.33■■□□□ 1.33
EIF4A1P60842 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EIF4A1P60842 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.33■■□□□ 1.33
EIF4A1P60842 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.33■■□□□ 1.33
EIF4A1P60842 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
EIF4A1P60842 AC073592.3-201ENST00000625118 1834 ntBASIC23.33■■□□□ 1.32
EIF4A1P60842 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
EIF4A1P60842 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
EIF4A1P60842 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
EIF4A1P60842 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
EIF4A1P60842 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
EIF4A1P60842 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.33■■□□□ 1.32
EIF4A1P60842 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.32■■□□□ 1.32
EIF4A1P60842 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
EIF4A1P60842 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.32■■□□□ 1.32
EIF4A1P60842 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.32■■□□□ 1.32
EIF4A1P60842 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.32■■□□□ 1.32
EIF4A1P60842 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.32■■□□□ 1.32
EIF4A1P60842 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.32■■□□□ 1.32
EIF4A1P60842 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.32■■□□□ 1.32
EIF4A1P60842 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.32■■□□□ 1.32
EIF4A1P60842 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.32■■□□□ 1.32
EIF4A1P60842 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
EIF4A1P60842 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EIF4A1P60842 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
EIF4A1P60842 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
EIF4A1P60842 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
EIF4A1P60842 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.31■■□□□ 1.32
EIF4A1P60842 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.31■■□□□ 1.32
EIF4A1P60842 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.31■■□□□ 1.32
EIF4A1P60842 MIR5100-201ENST00000579544 119 ntBASIC23.31■■□□□ 1.32
EIF4A1P60842 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.31■■□□□ 1.32
EIF4A1P60842 AL138831.2-201ENST00000606564 490 ntBASIC23.31■■□□□ 1.32
EIF4A1P60842 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.31■■□□□ 1.32
EIF4A1P60842 REXO1L6P-202ENST00000619970 1078 ntBASIC23.31■■□□□ 1.32
EIF4A1P60842 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.31■■□□□ 1.32
EIF4A1P60842 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 KRT8P10-201ENST00000450021 1447 ntBASIC23.31■■□□□ 1.32
EIF4A1P60842 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.31■■□□□ 1.32
EIF4A1P60842 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EIF4A1P60842 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.3■■□□□ 1.32
EIF4A1P60842 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.3■■□□□ 1.32
EIF4A1P60842 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.3■■□□□ 1.32
EIF4A1P60842 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EIF4A1P60842 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms