Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PAX9P55771 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PAX9P55771 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PAX9P55771 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.72□□□□□ -0.05
PAX9P55771 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.72□□□□□ -0.05
PAX9P55771 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PAX9P55771 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 AC090192.1-201ENST00000517740 490 ntBASIC14.72□□□□□ -0.05
PAX9P55771 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.72□□□□□ -0.05
PAX9P55771 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.72□□□□□ -0.05
PAX9P55771 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PAX9P55771 HCG11-201ENST00000411553 5696 ntBASIC14.72□□□□□ -0.05
PAX9P55771 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.71□□□□□ -0.05
PAX9P55771 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
PAX9P55771 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.71□□□□□ -0.05
PAX9P55771 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PAX9P55771 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 AL138781.1-201ENST00000566567 1274 ntBASIC14.71□□□□□ -0.05
PAX9P55771 AC142086.2-201ENST00000569753 217 ntBASIC14.71□□□□□ -0.05
PAX9P55771 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.71□□□□□ -0.05
PAX9P55771 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.71□□□□□ -0.05
PAX9P55771 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX9P55771 AC133041.1-202ENST00000642053 222 ntBASIC14.71□□□□□ -0.05
PAX9P55771 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.71□□□□□ -0.05
PAX9P55771 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX9P55771 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.71□□□□□ -0.06
PAX9P55771 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
PAX9P55771 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PAX9P55771 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.71□□□□□ -0.06
PAX9P55771 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PAX9P55771 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.7□□□□□ -0.06
PAX9P55771 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
PAX9P55771 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
PAX9P55771 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.7□□□□□ -0.06
PAX9P55771 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
PAX9P55771 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 MIR564-202ENST00000385049 94 ntBASIC14.7□□□□□ -0.06
PAX9P55771 AC004980.1-204ENST00000429707 299 ntBASIC14.7□□□□□ -0.06
PAX9P55771 AC091390.4-202ENST00000476426 537 ntBASIC14.7□□□□□ -0.06
PAX9P55771 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PAX9P55771 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.7□□□□□ -0.06
PAX9P55771 AC098934.4-201ENST00000564127 592 ntBASIC14.7□□□□□ -0.06
PAX9P55771 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 AC104771.1-201ENST00000603335 964 ntBASIC14.7□□□□□ -0.06
PAX9P55771 AL445675.2-201ENST00000620291 557 ntBASIC14.7□□□□□ -0.06
PAX9P55771 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PAX9P55771 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.7□□□□□ -0.06
PAX9P55771 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PAX9P55771 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms