Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH13P55290 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH13P55290 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.93■□□□□ 0.46
CDH13P55290 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH13P55290 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
CDH13P55290 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH13P55290 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH13P55290 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
CDH13P55290 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH13P55290 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CDH13P55290 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH13P55290 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDH13P55290 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH13P55290 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH13P55290 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH13P55290 AP003071.4-201ENST00000562276 1284 ntBASIC17.92■□□□□ 0.46
CDH13P55290 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH13P55290 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 SDHAP2-201ENST00000455183 2001 ntBASIC17.92■□□□□ 0.46
CDH13P55290 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
CDH13P55290 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH13P55290 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH13P55290 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH13P55290 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH13P55290 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH13P55290 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH13P55290 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH13P55290 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH13P55290 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDH13P55290 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH13P55290 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH13P55290 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH13P55290 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH13P55290 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.91■□□□□ 0.46
CDH13P55290 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH13P55290 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH13P55290 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH13P55290 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms