Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH6P55285 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CDH6P55285 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH6P55285 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDH6P55285 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH6P55285 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH6P55285 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH6P55285 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH6P55285 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH6P55285 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CDH6P55285 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH6P55285 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH6P55285 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDH6P55285 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDH6P55285 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 REXO1L9P-201ENST00000604264 2108 ntBASIC19.06■□□□□ 0.64
CDH6P55285 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CDH6P55285 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.06■□□□□ 0.64
CDH6P55285 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 AC009065.1-201ENST00000564055 1225 ntBASIC19.06■□□□□ 0.64
CDH6P55285 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 AC024243.1-201ENST00000609234 778 ntBASIC19.06■□□□□ 0.64
CDH6P55285 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH6P55285 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
CDH6P55285 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH6P55285 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH6P55285 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
CDH6P55285 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH6P55285 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH6P55285 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.05■□□□□ 0.64
CDH6P55285 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH6P55285 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 AC010240.3-201ENST00000607688 395 ntBASIC19.05■□□□□ 0.64
CDH6P55285 AC133561.5-201ENST00000635547 218 ntBASIC19.05■□□□□ 0.64
CDH6P55285 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH6P55285 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH6P55285 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH6P55285 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH6P55285 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH6P55285 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms