Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHBP55084 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHBP55084 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HADHBP55084 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHBP55084 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.16■□□□□ 0.66
HADHBP55084 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HADHBP55084 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.16■□□□□ 0.66
HADHBP55084 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHBP55084 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HADHBP55084 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.16■□□□□ 0.66
HADHBP55084 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.16■□□□□ 0.66
HADHBP55084 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HADHBP55084 SIRPAP1-201ENST00000448467 1770 ntBASIC19.16■□□□□ 0.66
HADHBP55084 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHBP55084 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHBP55084 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHBP55084 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHBP55084 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHBP55084 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HADHBP55084 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 MIR718-201ENST00000390190 70 ntBASIC19.15■□□□□ 0.66
HADHBP55084 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.15■□□□□ 0.66
HADHBP55084 AC008550.1-201ENST00000511500 884 ntBASIC19.15■□□□□ 0.66
HADHBP55084 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHBP55084 C2orf69P3-201ENST00000565542 1120 ntBASIC19.15■□□□□ 0.66
HADHBP55084 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
HADHBP55084 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.15■□□□□ 0.66
HADHBP55084 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HADHBP55084 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HADHBP55084 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HADHBP55084 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHBP55084 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.14■□□□□ 0.66
HADHBP55084 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HADHBP55084 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHBP55084 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.14■□□□□ 0.65
HADHBP55084 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.14■□□□□ 0.65
HADHBP55084 AL390955.1-201ENST00000428694 934 ntBASIC19.14■□□□□ 0.65
HADHBP55084 SEC1P-202ENST00000473944 940 ntBASIC19.14■□□□□ 0.65
HADHBP55084 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.14■□□□□ 0.65
HADHBP55084 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
HADHBP55084 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.14■□□□□ 0.65
HADHBP55084 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HADHBP55084 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HADHBP55084 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHBP55084 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HADHBP55084 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHBP55084 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHBP55084 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HADHBP55084 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HADHBP55084 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHBP55084 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms