Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RAD23BP54727 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RAD23BP54727 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RAD23BP54727 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAD23BP54727 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.57■□□□□ 0.72
RAD23BP54727 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.57■□□□□ 0.72
RAD23BP54727 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.57■□□□□ 0.72
RAD23BP54727 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.57■□□□□ 0.72
RAD23BP54727 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.57■□□□□ 0.72
RAD23BP54727 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.57■□□□□ 0.72
RAD23BP54727 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RAD23BP54727 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.57■□□□□ 0.72
RAD23BP54727 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.57■□□□□ 0.72
RAD23BP54727 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.57■□□□□ 0.72
RAD23BP54727 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAD23BP54727 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAD23BP54727 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.56■□□□□ 0.72
RAD23BP54727 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.56■□□□□ 0.72
RAD23BP54727 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RAD23BP54727 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.56■□□□□ 0.72
RAD23BP54727 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.56■□□□□ 0.72
RAD23BP54727 PVRIG2P-201ENST00000435460 978 ntBASIC19.56■□□□□ 0.72
RAD23BP54727 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.56■□□□□ 0.72
RAD23BP54727 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.56■□□□□ 0.72
RAD23BP54727 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAD23BP54727 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.55■□□□□ 0.72
RAD23BP54727 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAD23BP54727 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RAD23BP54727 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RAD23BP54727 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAD23BP54727 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.55■□□□□ 0.72
RAD23BP54727 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 FZD10-202ENST00000539839 3282 ntBASIC19.55■□□□□ 0.72
RAD23BP54727 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RAD23BP54727 AC092647.4-201ENST00000457211 535 ntBASIC19.55■□□□□ 0.72
RAD23BP54727 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RAD23BP54727 AC092597.1-201ENST00000487352 616 ntBASIC19.55■□□□□ 0.72
RAD23BP54727 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.55■□□□□ 0.72
RAD23BP54727 AL049597.2-201ENST00000565575 961 ntBASIC19.55■□□□□ 0.72
RAD23BP54727 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms