Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PMS1P54277 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.16■□□□□ 0.82
PMS1P54277 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.16■□□□□ 0.82
PMS1P54277 NAPSB-206ENST00000562112 1266 ntBASIC20.16■□□□□ 0.82
PMS1P54277 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.16■□□□□ 0.82
PMS1P54277 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
PMS1P54277 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.15■□□□□ 0.82
PMS1P54277 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.15■□□□□ 0.82
PMS1P54277 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PMS1P54277 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.15■□□□□ 0.82
PMS1P54277 SEC1P-202ENST00000473944 940 ntBASIC20.15■□□□□ 0.82
PMS1P54277 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.15■□□□□ 0.82
PMS1P54277 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.15■□□□□ 0.82
PMS1P54277 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PMS1P54277 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS1P54277 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS1P54277 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PMS1P54277 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
PMS1P54277 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PMS1P54277 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PMS1P54277 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PMS1P54277 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 AC009947.2-201ENST00000444014 672 ntBASIC20.14■□□□□ 0.81
PMS1P54277 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS1P54277 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.14■□□□□ 0.81
PMS1P54277 AC093827.2-201ENST00000512654 315 ntBASIC20.14■□□□□ 0.81
PMS1P54277 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.14■□□□□ 0.81
PMS1P54277 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.14■□□□□ 0.81
PMS1P54277 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.14■□□□□ 0.81
PMS1P54277 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.14■□□□□ 0.81
PMS1P54277 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PMS1P54277 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS1P54277 AC093010.1-201ENST00000473625 1624 ntBASIC20.13■□□□□ 0.81
PMS1P54277 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.13■□□□□ 0.81
PMS1P54277 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS1P54277 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS1P54277 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PMS1P54277 AC010240.3-201ENST00000607688 395 ntBASIC20.13■□□□□ 0.81
PMS1P54277 AC024243.1-201ENST00000609234 778 ntBASIC20.13■□□□□ 0.81
PMS1P54277 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PMS1P54277 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.13■□□□□ 0.81
PMS1P54277 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PMS1P54277 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PMS1P54277 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.12■□□□□ 0.81
PMS1P54277 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PMS1P54277 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms